Database Structure - Global Marker Database for Phytophthora infestans



Field Name Type Size Field Description
ISOLATE A 18 Original isolate designation of contributing institution
COUNTRY A 21 Country where isolated
ISO A 10 ISO two-letter country code
LOCATION A 33 Region of country where isolated
HOST A 14 Potato, tomato, etc.
CULTIVAR A 18 Cultivar of host
DATE A 16 Date or year isolated
COMMENT A 11 Information not covered in the above variables
MATING_T A 11 Mating type ('A1', 'A2', or 'SF')
GPI A 8 Glucose-6-phosphate isomerase (Gpi) genotype
PEP A 10 Peptidase (Pep) genotype
FING_PRT A 26 DNA fingerprint (As determined with the moderately repetitive DNA probe RG57(15))
FP9A A 6 DNA fingerprint band between bands 9 and 10 (These are additional DNA fingerprint bands discovered after bands 1-25 were numbered.)
FP14A A 8 DNA fingerprint band between bands 14 and 15 (These are additional DNA fingerprint bands discovered after bands 1-25 were numbered.)
FP24A A 10 DNA fingerprint band between bands 24 and 25 (These are additional DNA fingerprint bands discovered after bands 1-25 were numbered.)
FP25A A 7 DNA fingerprint band after band 25 (These are additional DNA fingerprint bands discovered after bands 1-25 were numbered.)
MT_DNA A 14 Mitochondrial DNA pattern (As described by Goodwin (10) or Carter et al (3).)
METALAX A 11 Sensitivity to metalaxyl ('R', 'M', 'S') (R=resistant, M=moderately resistant and S=sensitive, as described by Therrien et al.)
VIRULENCE A 18 Specific virulence on 11 known S. demissium R-genes
GENOTYPE A 11 Multilocus genotype name
PUB_GEN A 12 Published genotype name which is inconsistent with nomenclature (Based on nomenclature described in Materials and Methods.)
SOURCE A 21 Original supplier of isolate, infected tissue or data
REFERENCE A 60 Where published initially